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  • NVIDIA
    NVIDIA Parabricks
    Container
    NVIDIA
    NVIDIA Parabricks

    NVIDIA Parabricks is an accelerated compute framework that supports applications across the genomics industry, primarily supporting analytical workflows for DNA, RNA, and somatic mutation detection applications.

  • LayerLabelCreated
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
    —
    		10/08/2025 7:29 PM UTC
    sha256:539b4e9d79ed0d0e4d8450bba5d7dc757ff273c831b46d68fb0730e83435ab69RUN
    if test -e /usr/local/parabricks/binaries/bin/collectmultiplemetrics ; then python3 -m pip install matplotlib ; fi
    		10/08/2025 7:29 PM UTC
    sha256:0f095f3ce386451a89a2e84ac8378e86bdacdf32ca0631616656666f9fc7b04eRUN
    if test -e /usr/local/parabricks/TiedHash.pm ; then mv /usr/local/parabricks/TiedHash.pm /etc/perl/ ; fi
    		10/08/2025 7:29 PM UTC
    sha256:b4ffdb69489a262b070cdaeec933802d63d1c9abaf44daff9fd3283b95c6f73dADD
    parabricks/ /usr/local/parabricks/
    		10/08/2025 7:29 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
    —
    		10/08/2025 7:29 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    CUFILE_LOGFILE_PATH=/tmp/cufile.log
    		10/08/2025 7:29 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    PATH=/usr/local/parabricks:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
    		10/08/2025 7:29 PM UTC
    sha256:2969105830d6fd3bd80c63045f9a7c33261325c9a438f0c382fd0b5181e9b234RUN
    CUDA_PACKAGE=-12-9 apt update &&
  apt update --fix-missing &&
  apt -y upgrade
    		10/08/2025 7:29 PM UTC
    sha256:9cd6247cb961d7618879a3602efb7589ea8f360c7f370c2e2317be20b54eb2a7RUN
    CUDA_PACKAGE=-12-9 DEBIAN_FRONTEND=noninteractive apt install --no-install-recommends -y bcftools gds-tools$CUDA_PACKAGE libboost-filesystem-dev libboost-iostreams-dev libboost-program-options-dev libboost-system-dev libbz2-1.0 libcufile-dev$CUDA_PACKAGE libgomp1 libisal2 libjemalloc-dev liblzma5 libtcmalloc-minimal4 perl python3 python3-distlib python3-pip samtools zlib1g libprotobuf-dev
    		10/08/2025 7:29 PM UTC
    sha256:673b8c224bf0eece3707bfe6144f3213211e7e6006acc6287f2d1410eec235b4RUN
    CUDA_PACKAGE=-12-9 apt update &&
  apt update --fix-missing
    		10/08/2025 7:29 PM UTC