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  • NVIDIA
    NVIDIA Parabricks
    Container
    NVIDIA
    NVIDIA Parabricks

    NVIDIA Parabricks is an accelerated compute framework that supports applications across the genomics industry, primarily supporting analytical workflows for DNA, RNA, and somatic mutation detection applications.

  • LayerLabelCreated
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
    /parabricks/run_pipeline.py
    		05/26/2022 2:01 AM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/miniconda/bin
    		05/26/2022 2:01 AM UTC
    sha256:a8812e0a3483eabd042f873eeffaf5abd585a5122a40154b2b886991ce2af6b4RUN
    /mnt/disk/dnabricks/pydeps/package/docker-script.sh /mnt/disk/dnabricks /usr/local/cuda
    		05/26/2022 2:01 AM UTC
    sha256:f35f68d9af68d8fd4769da7f945694dc5347a0ce3d5922a6a65ca30ef298e61dRUN
    CUDA_VER=10.1 OS_DIST=ubuntu18.04 apt update &&
  apt -y upgrade
    		04/29/2022 10:02 PM UTC
    sha256:cfe304cc4cd2e503658673d150d91fdb0e07e9caa23f844401a5c5015d7670c2RUN
    CUDA_VER=10.1 OS_DIST=ubuntu18.04 rm -f /etc/apt/sources.list.d/cuda.list /etc/apt/sources.list.d/nvidia-ml.list &&
  wget https://developer.download.nvidia.com/compute/cuda/repos/$(echo $OS_DIST | tr -d '.')/${ARCH}/cuda-keyring_1.0-1_all.deb &&
  dpkg -i ./cuda-keyring_1.0-1_all.deb
    		04/29/2022 10:02 PM UTC
    sha256:05bd6d7c873b45d440b992c908c0806afceeeb9e1645c0d4d3a7d538315a93a6RUN
    CUDA_VER=10.1 OS_DIST=ubuntu18.04 apt update; apt install -y wget
    		04/29/2022 10:02 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4RUN
    CUDA_VER=10.1 OS_DIST=ubuntu18.04 rm -rf /var/lib/apt/lists/*
    		04/29/2022 10:02 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    ARCH=x86_64
    		04/29/2022 10:02 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ARG
    OS_DIST
    		04/29/2022 10:02 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ARG
    CUDA_VER
    		04/29/2022 10:02 PM UTC