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NVIDIA
NVIDIA Parabricks
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NVIDIA
NVIDIA
NVIDIA Parabricks

NVIDIA Parabricks is an accelerated compute framework that supports applications across the genomics industry, primarily supporting analytical workflows for DNA, RNA, and somatic mutation detection applications.

NVIDIA AI Enterprise Supported
LayerLabelCreated
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
—
06/05/2025 4:40 PM UTC
sha256:5d1671fdc5780f437ba70eb40dc9038a123e4d92cf3d2e7637ab44f6eac2ba19RUN
if test -e /usr/local/parabricks/binaries/bin/collectmultiplemetrics ; then python3 -m pip install matplotlib ; fi
06/05/2025 4:40 PM UTC
sha256:70685e5cf7cf73906d234e35c6c98df98d4ab69d45c0cab241e8af7924279356RUN
if test -e /usr/local/parabricks/TiedHash.pm ; then mv /usr/local/parabricks/TiedHash.pm /etc/perl/ ; fi
06/05/2025 4:40 PM UTC
sha256:ce396821fa625e40cdf246c182236efc6c55a930ddf37cee3e326ed0224808ddADD
parabricks/ /usr/local/parabricks/
06/05/2025 4:40 PM UTC
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
—
06/05/2025 4:40 PM UTC
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
CUFILE_LOGFILE_PATH=/tmp/cufile.log
06/05/2025 4:40 PM UTC
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
PATH=/usr/local/parabricks:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
06/05/2025 4:40 PM UTC
sha256:940d6e4c383ff8dfd38bc94abab02e2c8fee955f63bae4d8efc4679e8ad8ac0aRUN
CUDA_PACKAGE=-12-9 apt update &&
  apt update --fix-missing &&
  apt -y upgrade
06/05/2025 4:40 PM UTC
sha256:68c758a9e77e2bbde6e00f4c9e081bdf4f5bd366141432a024f780e89c1ec6f4RUN
CUDA_PACKAGE=-12-9 DEBIAN_FRONTEND=noninteractive apt install --no-install-recommends -y bcftools gds-tools$CUDA_PACKAGE libboost-filesystem-dev libboost-iostreams-dev libboost-program-options-dev libboost-system-dev libbz2-1.0 libcufile-dev$CUDA_PACKAGE libgomp1 libisal2 libjemalloc-dev liblzma5 libtcmalloc-minimal4 perl python3 python3-distlib python3-pip samtools zlib1g libprotobuf-dev
06/05/2025 4:40 PM UTC
sha256:c3c0066eeb703a9ea0661d2ef8feab8ec713165cb0ed2213f8fd241c828274f3RUN
CUDA_PACKAGE=-12-9 apt update &&
  apt update --fix-missing
06/05/2025 4:39 PM UTC