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  • NVIDIA
    NVIDIA Parabricks
    Container
    NVIDIA
    NVIDIA Parabricks

    NVIDIA Parabricks is an accelerated compute framework that supports applications across the genomics industry, primarily supporting analytical workflows for DNA, RNA, and somatic mutation detection applications.

  • LayerLabelCreated
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
    /parabricks/run_pipeline.py
    		06/29/2021 9:13 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/miniconda/bin
    		06/29/2021 9:13 PM UTC
    sha256:18d8dd0bb756b387623ad4fbf0bfbc46b6fde7a6fb40df06d83448f1487db1a1RUN
    /mnt/disk/dnabricks/pydeps/package/docker-script.sh /mnt/disk/dnabricks /usr/local/cuda
    		06/29/2021 9:13 PM UTC
    sha256:f5479a8abddb79864d220a588aa266678a0e018adc74a8f2ae8a0a85cb86e736RUN
    apt update &&
  apt -y upgrade
    		06/25/2021 4:06 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    NVIDIA_REQUIRE_CUDA=cuda>=10.1 brand=tesla,driver>=396,driver<397 brand=tesla,driver>=410,driver<411 brand=tesla,driver>=418,driver<419
    		12/14/2020 11:31 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    NVIDIA_DRIVER_CAPABILITIES=compute,utility
    		12/14/2020 11:31 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    NVIDIA_VISIBLE_DEVICES=all
    		12/14/2020 11:31 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    LD_LIBRARY_PATH=/usr/local/nvidia/lib:/usr/local/nvidia/lib64
    		12/14/2020 11:31 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
    		12/14/2020 11:31 PM UTC
    sha256:88c0e0db918c9519d7e6d22439e2fc61b18836b6291e777121010d6baef58accRUN
    echo "/usr/local/nvidia/lib" >> /etc/ld.so.conf.d/nvidia.conf &&
  echo "/usr/local/nvidia/lib64" >> /etc/ld.so.conf.d/nvidia.conf
    		12/14/2020 11:31 PM UTC