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  • NVIDIA
    NVIDIA Parabricks
    Container
    NVIDIA
    NVIDIA Parabricks

    NVIDIA Parabricks is an accelerated compute framework that supports applications across the genomics industry, primarily supporting analytical workflows for DNA, RNA, and somatic mutation detection applications.

  • LayerLabelCreated
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
    /parabricks/run_pipeline.py
    		06/16/2022 1:46 AM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/miniconda/bin
    		06/16/2022 1:46 AM UTC
    sha256:0f3814e1da525b57a8e5023e3d0095c19e52ff7c37847735afd66522315c69efRUN
    /mnt/disk/dnabricks/pydeps/package/docker-script.sh /mnt/disk/dnabricks /usr/local/cuda
    		06/16/2022 1:46 AM UTC
    sha256:88573f0d0f819035d8c9596b9f8cdbcfbaf06c08585984ae6ddcc4e7431a6466RUN
    CUDA_VER=11.1.1 OS_DIST=ubuntu18.04 apt update &&
  apt -y upgrade
    		04/29/2022 9:58 PM UTC
    sha256:18e3cde4aec0c33dbffa640b0fb880644bc2ac8a5fdf0141af780b555114ede0RUN
    CUDA_VER=11.1.1 OS_DIST=ubuntu18.04 rm -f /etc/apt/sources.list.d/cuda.list /etc/apt/sources.list.d/nvidia-ml.list &&
  wget https://developer.download.nvidia.com/compute/cuda/repos/$(echo $OS_DIST | tr -d '.')/${ARCH}/cuda-keyring_1.0-1_all.deb &&
  dpkg -i ./cuda-keyring_1.0-1_all.deb
    		04/29/2022 9:58 PM UTC
    sha256:279825cd0e7d3dd5434632b583038602e0fb6325c4744f117a7fb62716ee6ee7RUN
    CUDA_VER=11.1.1 OS_DIST=ubuntu18.04 apt update; apt install -y wget
    		04/29/2022 9:58 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4RUN
    CUDA_VER=11.1.1 OS_DIST=ubuntu18.04 rm -rf /var/lib/apt/lists/*
    		04/29/2022 9:58 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    ARCH=x86_64
    		04/29/2022 9:58 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ARG
    OS_DIST
    		04/29/2022 9:58 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ARG
    CUDA_VER
    		04/29/2022 9:58 PM UTC

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