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  • NVIDIA
    NVIDIA Parabricks
    Container
    NVIDIA
    NVIDIA Parabricks

    NVIDIA Parabricks is an accelerated compute framework that supports applications across the genomics industry, primarily supporting analytical workflows for DNA, RNA, and somatic mutation detection applications.

  • LayerLabelCreated
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
    /parabricks/run_pipeline.py
    		06/29/2021 1:26 AM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/miniconda/bin
    		06/29/2021 1:26 AM UTC
    sha256:53e38f462771198c968e7c4fd307ee6cff2f619c4c79860e4ff03f702e7d3e71RUN
    /mnt/disk/dnabricks/pydeps/package/docker-script.sh /mnt/disk/dnabricks /usr/local/cuda
    		06/29/2021 1:26 AM UTC
    sha256:c284993ab0e29013dd6b8477d46e11988e1a786c964ed1c961de786671c724d4RUN
    apt update &&
  apt -y upgrade
    		06/25/2021 3:47 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    NVIDIA_REQUIRE_CUDA=cuda>=11.0 brand=tesla,driver>=418,driver<419 brand=tesla,driver>=440,driver<441 brand=tesla,driver>=450,driver<451
    		10/01/2020 2:03 AM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    NVIDIA_DRIVER_CAPABILITIES=compute,utility
    		10/01/2020 2:03 AM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    NVIDIA_VISIBLE_DEVICES=all
    		10/01/2020 2:03 AM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    LD_LIBRARY_PATH=/usr/local/nvidia/lib:/usr/local/nvidia/lib64
    		10/01/2020 2:03 AM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
    		10/01/2020 2:03 AM UTC
    sha256:8189556b23294579329c522acf5618c024520b323d6a68cdd9eca91ca4f2f454RUN
    echo "/usr/local/nvidia/lib" >> /etc/ld.so.conf.d/nvidia.conf &&
  echo "/usr/local/nvidia/lib64" >> /etc/ld.so.conf.d/nvidia.conf
    		10/01/2020 2:03 AM UTC