NVIDIA
NVIDIA
NVIDIA Parabricks
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NVIDIA
NVIDIA
NVIDIA Parabricks

NVIDIA Parabricks is an accelerated compute framework that supports applications across the genomics industry, primarily supporting analytical workflows for DNA, RNA, and somatic mutation detection applications.

LayerLabelCreated
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
09/12/2024 2:36 AM UTC
sha256:38a31a80fa0a7e2c5cf08016360f79ef82172263386005bc8a3a9841d00a9694RUN
DEBIAN_FRONTEND=noninteractive apt purge -y wget
09/12/2024 2:36 AM UTC
sha256:ed22a99db49c6e1ac2f6f13279d794e5dff8dd0f25b67ad50527854d4381fab5RUN
wget https://developer.download.nvidia.com/compute/nvcomp/4.0.0/local_installers/nvcomp-linux-sbsa-4.0.0-cuda12.5.tar.gz -O /tmp/nvcomp-linux-sbsa-4.0.0-cuda12.5.tar.gz &&
  tar -xzf /tmp/nvcomp-linux-sbsa-4.0.0-cuda12.5.tar.gz --directory /tmp &&
  cp --recursive /tmp/nvcomp/lib/* /usr/local/parabricks/binaries/lib &&
  rm -rf /tmp/*
09/12/2024 2:36 AM UTC
sha256:264cd5d502eccb3541973a56ffe4e9a246210c73993db90b1599ed512e5d8745RUN
DEBIAN_FRONTEND=noninteractive apt install --no-install-recommends -y wget
09/12/2024 2:36 AM UTC
sha256:a37eaca214f1002536cc51784304567b536c089fe20ca56a89e9f279464bf16cRUN
if test -e /usr/local/parabricks/binaries/bin/collectmultiplemetrics ; then python3 -m pip install matplotlib ; fi
09/12/2024 2:36 AM UTC
sha256:b24521b8a763e5b89ac487b9461073d072f264708cc726a4807bf7b05f37e582RUN
if test -e /usr/local/parabricks/TiedHash.pm ; then mv /usr/local/parabricks/TiedHash.pm /etc/perl/ ; fi
09/12/2024 2:36 AM UTC
sha256:cf1e9840ed20f47af3f22fadbaa134b672a3aacb636012828024805e20382231ADD
parabricks/ /usr/local/parabricks/
09/12/2024 2:36 AM UTC
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
09/12/2024 2:35 AM UTC
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
CUFILE_LOGFILE_PATH=/tmp/cufile.log
09/12/2024 2:35 AM UTC
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
PATH=/usr/local/parabricks:/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09/12/2024 2:35 AM UTC

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