ColabFold
msa-search
Container
ColabFold
msa-search

The Multiple Sequence Alignment (MSA) Search NIM enables protein structure prediction models by providing fast, accurate sequence alignments of a query amino acid sequence against large databases of known proteins.

  • LayerLabelCreated
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
    ["/bin/bash" "-c" "$SERVER_START_SCRIPT_PATH"]
    03/17/2025 4:31 PM UTC
    sha256:4df2b2dedacd30aec29ce77da67857967028cef3cd8cb96b5b7743fe0718fa64RUN
    RUN /bin/sh -c touch $SERVER_START_SCRIPT_PATH &&
      chmod a+rx $SERVER_START_SCRIPT_PATH &&
      cat > $SERVER_START_SCRIPT_PATH <<-EOF #!/usr/bin/env bash set -eu # SPDX-FileCopyrightText: Copyright (c) 2024 NVIDIA CORPORATION & AFFILIATES. All rights reserved. # SPDX-License-Identifier: LicenseRef-NvidiaProprietary start_server EOF # buildkit
    03/17/2025 4:31 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    SERVER_START_SCRIPT_PATH=/opt/nim/start_server.sh
    03/17/2025 4:31 PM UTC
    sha256:6ab46e2d3858395d61832120c8efe6166aafba12ee8f298e17daa644fdc74c95COPY
    model_manifest.yaml /opt/nim/etc/default/model_manifest.yaml
    03/17/2025 4:31 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4USER
    nvs:1000
    03/17/2025 4:31 PM UTC
    sha256:e312baff9ec9643c7caba39e6182a84b4cb133bdc63ff5d810e3d60d0d0f04c8RUN
    groupadd --gid 1000 --non-unique nvs &&
      useradd --create-home --shell /usr/sbin/nologin --uid 1000 --non-unique --gid 1000 nvs &&
      chown 1000.1000 $NIM_DIR_PATH
    03/17/2025 4:31 PM UTC
    sha256:bacd8abc7a2438e812b04201ba9f87132341b2483d1142b2de20d279ba8ccbedCOPY
    ./LICENSE ./VERSION /opt/nim
    03/17/2025 4:31 PM UTC
    sha256:b93a025529396ee2855e33a7b1bb0fac64dfe3093ded47df8f539628de05625dCOPY
    ./inference.py /opt/nim
    03/17/2025 4:31 PM UTC
    sha256:50ddf3bacba4406b857275881dba6e305ba1374872e0b5678f6b0b6d96cb84cbRUN
    nim_dependency_handler
    03/17/2025 4:31 PM UTC
    sha256:3f30221716682b4a9f60c0980a5ad542f232c8722cc7125bd4785a0569d375acCOPY
    --chmod=755 lib /opt/nim/lib/.
    03/17/2025 4:31 PM UTC
    ...