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  • NVIDIA
    DeepSap
    Container
    NVIDIA
    DeepSap

    DeepSAP is a transformer-based workflow designed to enhance splice junction detection in RNA-seq data.

  • LayerLabelCreated
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
    ["python3" "/scripts/DeepSAP.py"]
    		08/04/2026 6:28 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4USER
    10001:10001
    		08/04/2026 6:28 PM UTC
    sha256:4f4fb700ef54461cfa02571ae0db9a0dc1e0cdb5577484a6d75e68dc38e8acc1WORKDIR
    /workdir
    		08/04/2026 6:28 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    LOGNAME=deepsap
    		08/04/2026 6:28 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    USER=deepsap
    		08/04/2026 6:28 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    HOME=/tmp
    		08/04/2026 6:28 PM UTC
    sha256:2056d2b021071cd3aba39cde543adb721418a6db67495d07399c26e2c7782744RUN
    set -eux; groupadd --gid 10001 deepsap; useradd --uid 10001 --gid 10001 --create-home --home-dir /home/deepsap --shell /usr/sbin/nologin deepsap; mkdir -p /workdir /outputdir; chown -R 10001:10001 /home/deepsap /opt/deepsap/cache /workdir /outputdir; chmod -R a+rX /scripts /DeepSAP/tuned_models /DNA_bert_6 /opt/gsnap-info /OSS_source_code
    		08/04/2026 6:28 PM UTC
    sha256:b46a852367d0c86d226b505a17a5fcfea5e941a602f43ae494c040b3161228e4COPY
    ./oss_source_code/oss_source_code_v0.1.0.tar.gz /OSS_source_code/
    		08/04/2026 6:28 PM UTC
    sha256:61b0bbceb055bd121139c92ff076bef8543ed9c1c72e4a5f36c0c484ff279d3fCOPY
    scripts/DeepSAP.py scripts/gsnap_commands.py scripts/utility_FASTA.py scripts/utility_GTF.py scripts/utility_SAM.py scripts/utility_transformers.py scripts/parameters_config.json scripts/predict.py /scripts/
    		08/04/2026 6:28 PM UTC
    sha256:4ed4aabbc0136a5737ac9a7a341e0a56b09df1a83a83bffbbd408f230c7fa77cRUN
    mkdir -p /scripts/
    		08/04/2026 6:28 PM UTC
    ...