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  • NVIDIA
    DeepSap
    Container
    NVIDIA
    DeepSap

    DeepSAP is a transformer-based workflow designed to enhance splice junction detection in RNA-seq data.

  • LayerLabelCreated
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
    ["sh" "/scripts/DeepSAP_wrapper.sh"]
    		07/18/2025 5:02 PM UTC
    sha256:e0f4e6fc3ec6526b224e96a6ad39f86b6de4cae0544d4bc9ddd7b9f3ebbe5130WORKDIR
    /workdir
    		07/18/2025 5:02 PM UTC
    sha256:b89a50008a75aef7ee75919c0fd66f7c34823dddbd5cca04807b0dd8c32677d0COPY
    ./oss_source_code/oss_source_code_v0.0.1.tar.gz /OSS_source_code/
    		07/18/2025 5:02 PM UTC
    sha256:dc3fc457f6d27ef13ba1deb1a84c283d6c15b14f836ed334a4a9d96c3bd2b318RUN
    rm -rf /scripts/predict.py /scripts/utility_transformers.py /scripts/utility_SAM.py /scripts/utility_GTF.py /scripts/utility_FASTA.py /scripts/DeepSAP.py
    		07/18/2025 5:02 PM UTC
    sha256:89140c78e56295dbde519c76c80b0d5571260c51c3e410cfdbd828434835987dRUN
    passwd -l root
    		07/18/2025 5:02 PM UTC
    sha256:b1416bfed2c2e4f69f5690789f6891491eeb1ea1e1db314ad602f0345989c8f8RUN
    usermod -s /sbin/nologin root
    		07/18/2025 5:02 PM UTC
    sha256:c07d01f69291f514c5ece6af26b82a2d1c155a0abafd6bea1ca36793e9a38513RUN
    chmod +x /scripts/DeepSAP_wrapper.sh
    		07/18/2025 5:02 PM UTC
    sha256:332a2971bd80ceef8579a9e1d45b2a29fcf20dfbc5af4d230551e9dafe11b390RUN
    pyinstaller --onedir /scripts/DeepSAP.py --distpath /
    		07/18/2025 5:02 PM UTC
    sha256:2a6733c7c35d89b46d25bf40e0c4be86540769f62fbef69336542421c41b9537COPY
    scripts/DeepSAP.py scripts/DeepSAP_wrapper.sh scripts/utility_FASTA.py scripts/utility_GTF.py scripts/utility_SAM.py scripts/utility_transformers.py scripts/parameters_config.json scripts/predict.py /scripts/
    		07/18/2025 4:59 PM UTC
    sha256:eccae0703183a5e78f420277b582021d87b6855583afdd1c51b7533e9ed91913RUN
    mkdir -p /scripts/
    		07/15/2025 10:19 AM UTC
    ...

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