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  • NVIDIA
    DeepSap
    Container
    NVIDIA
    DeepSap

    DeepSAP is a transformer-based workflow designed to enhance splice junction detection in RNA-seq data.

  • LayerLabelCreated
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
    ["sh" "/scripts/DeepSAP_wrapper.sh"]
    		07/15/2025 5:05 PM UTC
    sha256:2b10db709db809c7c60f5e347806b187d96f227c99dc3026d04a6f2d4574437eWORKDIR
    /workdir
    		07/15/2025 5:05 PM UTC
    sha256:61a9a66a068b71318ac8d66a1d7c86b0f799364aa0ef9eeb8078179e6e3badb6COPY
    ./oss_source_code/oss_source_code_v0.0.1.tar.gz /OSS_source_code/
    		07/15/2025 5:05 PM UTC
    sha256:2079b337f28c68a6069b7e4662325ab9860a587f04b5247f8398ed51d42708e9RUN
    rm -rf /scripts/predict.py /scripts/utility_transformers.py /scripts/utility_SAM.py /scripts/utility_GTF.py /scripts/utility_FASTA.py /scripts/DeepSAP.py
    		07/15/2025 5:05 PM UTC
    sha256:3fc49af0795680bd2a53ff153b875e9400a106920d35bfa7c5a6add6cc4d4769RUN
    passwd -l root
    		07/15/2025 5:05 PM UTC
    sha256:af07846fce98887624dca957b3cb7f3fb082d3fa3bd7d0bea422dedb2770ca31RUN
    usermod -s /sbin/nologin root
    		07/15/2025 5:05 PM UTC
    sha256:3e2d727102e4a7e5d1cd7a55b626a2342ccb61dd56371cff8ea72b3f61c88364RUN
    chmod +x /scripts/DeepSAP_wrapper.sh
    		07/15/2025 5:05 PM UTC
    sha256:6caf297e5cdeca1d2d152b0e0847025da18f24d20558487d3f433ec8768ab300RUN
    pyinstaller --onedir /scripts/DeepSAP.py --distpath /
    		07/15/2025 5:05 PM UTC
    sha256:437266ad2e69c0493ce33698ae8b8a49566f9f3486b120f31daf8c293e611a75COPY
    scripts/DeepSAP.py scripts/DeepSAP_wrapper.sh scripts/utility_FASTA.py scripts/utility_GTF.py scripts/utility_SAM.py scripts/utility_transformers.py scripts/parameters_config.json scripts/predict.py /scripts/
    		07/15/2025 4:55 PM UTC
    sha256:eccae0703183a5e78f420277b582021d87b6855583afdd1c51b7533e9ed91913RUN
    mkdir -p /scripts/
    		07/15/2025 10:19 AM UTC
    ...

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