ipd
ProteinMPNN
Container
ipd
ProteinMPNN

Predicts amino acid sequences from 3D structure of proteins.

  • LayerLabelCreated
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4USER
    nvs
    07/31/2025 2:14 PM UTC
    sha256:41ae235be6d91bf834c6d039aefac0c2b7410411f3fe19b50d1b7531cf5b3babRUN
    NSPECT=NSPECT-BYZ0-PPW9 ln -s /opt/nim/benchmark.py /opt/benchmark.py # for backwards compatibilty with docs
    07/31/2025 2:14 PM UTC
    sha256:35174520e41dcf954a242c34ffa634107524abc7c26de6a4f9aaaede67fbd6caCOPY
    tests/benchmark.py tests/nim_client.py bionemo-common/nvcf_utils/nvcf_utils.py /opt/nim/
    07/31/2025 2:14 PM UTC
    sha256:5175f2949d63aec0f3fddd400b517ef3c24dd10d0a1529dbabd0e3578a7d94b0COPY
    service/inference.py service/model_defs.py service/model_utils.py service/nim_service_utils.py /opt/nim/
    07/31/2025 2:14 PM UTC
    sha256:1782bc88b114989f6b48b274ddf17f6e362ec88335cf307ac503cdf6fcaa572cRUN
    NSPECT=NSPECT-BYZ0-PPW9 pip install --no-deps /opt/app_wheels/*
    07/31/2025 2:14 PM UTC
    sha256:4f4fb700ef54461cfa02571ae0db9a0dc1e0cdb5577484a6d75e68dc38e8acc1RUN
    NSPECT=NSPECT-BYZ0-PPW9 pip uninstall -y python-apt # Even though it is in base image, removing GPL packages makes SWIPAT eaiser
    07/31/2025 2:14 PM UTC
    sha256:7f452e2ce594b9e408efe8964c94848bc69fd3b0c2e5f0a875dc2be5334df536RUN
    NSPECT=NSPECT-BYZ0-PPW9 apt-get autoremove -y --purge libpmi2-0 &&
      rm -rf /usr/local/cuda-12.6/NsightSystems-cli-2024.6.1 &&
      pip uninstall -y onnx tornado Pillow &&
      rm -rf /opt/pytorch/pytorch/third_party/onnx &&
      pip uninstall -y setuptools aiohttp jupyterlab jupyterlab-server jupyterlab_pygments jupyter_client jupyter-tensorboard jupyter_core jupytext
    07/31/2025 2:14 PM UTC
    sha256:9d44dd26803c53a72739056f34d057a94b25fb2e58137841a693a5c1e88499fcRUN
    NSPECT=NSPECT-BYZ0-PPW9 pip install --no-deps /opt/base_wheels/*
    07/31/2025 2:14 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
    ["/bin/sh" "-c" "exec \"$SERVER_START_SCRIPT_PATH\""]
    07/31/2025 2:14 PM UTC
    sha256:4f4fb700ef54461cfa02571ae0db9a0dc1e0cdb5577484a6d75e68dc38e8acc1WORKDIR
    /opt/nim
    07/31/2025 2:14 PM UTC
    ...

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