Resource
NVIDIA
Clara Deploy AI Pancreas Tumor Segmentation Pipeline[Deprecated] Clara Deploy AI Pancreas Tumor Segmentation Pipeline
0.6.0-2006.4
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- CD into a directory where pipelines will be stored, e.g.
mkdir -p ~/.clara/pipelines
cd ~/.clara/pipelines
- Use clara pull pipeline to download the pipeline definition
clara pull pipeline clara_ai_pancreas_pipeline
- Unzip test data
unzip app_pancreastumor-input_v1.zip -d input
- Unzip and Install model
sudo unzip app_pancreastumor-model_v1.zip -d /clara/common/models/
- Workaround for
0.5.0-preview-1release - pipeline definitions in the0.5.0-preview-1release does not contain full path to nvcr.io and does not include default pull secret. Edit the pipeline definition file and add the following after
name:
pull-secrets:
- ngc-clara
Find and prepend all image tags that start with clara/ with nvcr.io/nvstaging/
For example, change
name: my-pipeline
operators:
- name: clara-hqs
container:
image: clara/clara-hqs
to
name: my-pipeline
pull-secrets:
- ngc-clara
operators:
- name: clara-hqs
container:
image: nvcr.io/nvidia/clara/clara-hqs
- Install pipeline
clara create pipelines -p pancreas-tumor-pipeline.yaml
- Verify that the pipeline is correctly stored
clara list pipelines
- Verify that the stored pipeline is correct by examining the output of the following command
clara describe pipeline <pipeline ID>