Note: If the pipeline doesn't trigger, ensure that your system is configured to use two GPUs if applicable. Open the ~/.clara/charts/clara/values.yaml file and change availableGpus=1 to availableGpus=2. For this change to take effect, you will need to restart the platform and all components, republish the pipeline, and perform the above steps again.

1. CD into a directory where pipelines will be stored, e.g.

mkdir -p ~/.clara/pipelines
cd ~/.clara/pipelines

2. Use clara pull pipeline to download a pipeline definition:

clara pull pipeline clara_ai_covid19_pipeline

3. Unzip test data:

unzip app_lung-input_v1.zip -d input

4. Unzip and Install model:

sudo unzip app_covid-19-model_v1.zip -d /clara/common/models/

5. Install pipeline:

clara create pipelines -p COVID-19-pipeline.yaml

6. Verify that the pipeline is correctly stored

clara list pipelines

7. Verify that the stored pipeline is correct by examining the output of the following command:

kubectl describe pipeline <pipeline ID>