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NVIDIA Clara Parabricks
NVIDIA Clara Parabricks
Container for Training Parabricks DeepVariant
Container
NVIDIA Clara Parabricks
NVIDIA Clara Parabricks
Container for Training Parabricks DeepVariant

This container is used for running the data preprocessing part of DeepVariant Training pipeline including make_examples and shuffle

NVIDIA AI Enterprise Supported
LayerLabelCreated
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
—
10/06/2023 7:23 PM UTC
sha256:589c8c2db7adae926e9567abdcc08ea0ebd61349c53ed2a6718415d712bcc26aRUN
apt update &&
  apt update --fix-missing &&
  apt -y upgrade
10/06/2023 7:23 PM UTC
sha256:6a61923e275c1f913878a046dd331fe4daa548eea4a1e331eb92fba3ff67ed98RUN
/bin/bash -c apt-get update; apt-get install -y --no-install-recommends ./debian_package/artifact_folder_core/*.deb &&
  apt-get install -y --no-install-recommends ./debian_package/artifact_folder_make-examples/*.deb; apt-get install -y --no-install-recommends ./debian_package/artifact_folder_shuffle/*.deb; dpkg -l | grep parabricks; apt-get install -y --no-install-recommends python3-pip; python3 -m pip install matplotlib;
10/06/2023 7:23 PM UTC
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
NVIDIA_DRIVER_CAPABILITIES=compute,utility
06/30/2023 12:02 AM UTC
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
NVIDIA_VISIBLE_DEVICES=all
06/30/2023 12:02 AM UTC
sha256:8abd77f1cc9e5692e7294a87d457616afa33abb8a4ec0e6b8857e41d1fb36c90COPY
NGC-DL-CONTAINER-LICENSE /
06/30/2023 12:02 AM UTC
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
LD_LIBRARY_PATH=/usr/local/nvidia/lib:/usr/local/nvidia/lib64
06/30/2023 12:02 AM UTC
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
06/30/2023 12:02 AM UTC
sha256:0b0815e859edb53949be96f250c81f60d18bbe6fbdc9cc85f768ed7eae96b969RUN
TARGETARCH=amd64 echo "/usr/local/nvidia/lib" >> /etc/ld.so.conf.d/nvidia.conf &&
  echo "/usr/local/nvidia/lib64" >> /etc/ld.so.conf.d/nvidia.conf
06/30/2023 12:02 AM UTC
sha256:bac1f8a1c195b96b2fe3ef7cf127e12a19fee10d78eacb8111a95dd46e23b0d7RUN
TARGETARCH=amd64 apt-get update &&
  apt-get install -y --no-install-recommends cuda-cudart-12-2=${NV_CUDA_CUDART_VERSION} ${NV_CUDA_COMPAT_PACKAGE} &&
  rm -rf /var/lib/apt/lists/*
06/30/2023 12:02 AM UTC

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