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  • NVIDIA
    Parabricks Umi_Fgbio
    Container
    NVIDIA
    Parabricks Umi_Fgbio

    Parabricks Umi_Fgbio is a pipeline that processes sequencing reads with molecular barcodes, and provides impressive error correction and increased accuracy using a sequencing consensus read level.

  • LayerLabelCreated
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
    —
    		08/26/2026 8:30 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    PYTHONPATH=/usr/local/parabricks
    		08/26/2026 8:30 PM UTC
    sha256:47de414bed8fd5753ff430a7490797f830e924af677c1b4075c21f7f413398b8ADD
    parabricks/ /usr/local/parabricks/
    		08/26/2026 8:30 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
    —
    		08/26/2026 8:30 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
    PATH=/usr/local/parabricks:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
    		08/26/2026 8:30 PM UTC
    sha256:3fe24799fe047255ef7a99991c9982593654189784dd12ac45f9f84460fba260RUN
    CUDA_PACKAGE=-12-9 apt update &&
  apt update --fix-missing &&
  apt -y upgrade
    		08/26/2026 8:30 PM UTC
    sha256:a76793cf22c8ed743f88f0785fdd9eca19ac813fa98f900f3006e3769681bddaRUN
    CUDA_PACKAGE=-12-9 DEBIAN_FRONTEND=noninteractive apt install --no-install-recommends -y bcftools libboost-filesystem-dev libboost-iostreams-dev libboost-program-options-dev libboost-system-dev libbz2-1.0 libcufile-dev$CUDA_PACKAGE libgomp1 libisal2 libjemalloc-dev liblzma5 libtcmalloc-minimal4 python3 python3-distlib samtools zlib1g libprotobuf-dev
    		08/26/2026 8:30 PM UTC
    sha256:88c831420c02daf664566e1afb648c47d0ac76fc0c350ee941184e432bac18baRUN
    CUDA_PACKAGE=-12-9 apt update &&
  apt update --fix-missing
    		08/26/2026 8:29 PM UTC
    sha256:94b489e925e565bd7dcc416d5d87dbc3e7dbf59db52bd92df25dc37081146ed9RUN
    CUDA_PACKAGE=-12-9 mkdir --parents /usr/local/parabricks
    		08/26/2026 8:28 PM UTC
    sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ARG
    CUDA_PACKAGE=-12-9
    		08/26/2026 8:28 PM UTC