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Nvidia
Nvidia Clara Parabricks collectmultiplemetrics
Container
Nvidia
Nvidia Clara Parabricks collectmultiplemetrics

Run a GPU-accelerated version of GATK’s CollectMultipleMetrics.

LayerLabelCreated
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENTRYPOINT
—
09/19/2022 11:02 PM UTC
sha256:f56d08a1683bbcd4cf80302714ebe810fc767a430c807187218047bfaa80ecccRUN
apt update &&
  apt update --fix-missing &&
  apt -y upgrade
09/19/2022 11:02 PM UTC
sha256:808f3c5e81335e342f39512f393555906e4a941ac7478e59237771a8fa3ac366RUN
bash
09/19/2022 11:02 PM UTC
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
NVIDIA_DRIVER_CAPABILITIES=compute,utility
07/11/2022 8:49 PM UTC
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
NVIDIA_VISIBLE_DEVICES=all
07/11/2022 8:49 PM UTC
sha256:3eb73064088b62826e9ea4b1bcbd9b10270f134e45f6436214db7c8ebed6052bCOPY
NGC-DL-CONTAINER-LICENSE /
07/11/2022 8:49 PM UTC
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
LD_LIBRARY_PATH=/usr/local/nvidia/lib:/usr/local/nvidia/lib64
07/11/2022 8:49 PM UTC
sha256:a3ed95caeb02ffe68cdd9fd84406680ae93d633cb16422d00e8a7c22955b46d4ENV
PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
07/11/2022 8:49 PM UTC
sha256:d6949fcf1aef0c0e95826220c5f2731c2909492c994d70707d8c93eb4c815b99RUN
TARGETARCH=amd64 echo "/usr/local/nvidia/lib" >> /etc/ld.so.conf.d/nvidia.conf &&
  echo "/usr/local/nvidia/lib64" >> /etc/ld.so.conf.d/nvidia.conf
07/11/2022 8:49 PM UTC
sha256:773163705c35e00e6c9cdb84e4e8db9079b8777f8f3f62839ec2008af668f939RUN
TARGETARCH=amd64 apt-get update &&
  apt-get install -y --no-install-recommends cuda-cudart-11-2=${NV_CUDA_CUDART_VERSION} ${NV_CUDA_COMPAT_PACKAGE} &&
  ln -s cuda-11.2 /usr/local/cuda &&
  rm -rf /var/lib/apt/lists/*
07/11/2022 8:49 PM UTC
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