Description:

Polyp Detection RT-DETR is a RT-DETR model that is designed to detect polyps in colonoscopy images.\nThis model is ready for commercial use.

License/Terms of Use:

GOVERNING TERMS: Use of this model is governed by the NVIDIA Open Model License. Additional Information: Apache License Version 2.0.\nYou are responsible for ensuring that your use of NVIDIA AI Foundation Models complies with all applicable laws.

Reference(s):

The model is trained on the REAL-Colon dataset [1], utilizing the RT-DETR v2 architecture [2] and the ResNet50 backbone [3]. The backbone is pretrained on the NVImageNet dataset.

\n
[1] Biffi, Carlo, et al. \"REAL-Colon: A dataset for developing real-world AI applications in colonoscopy.\" Scientific Data 11.1 (2024): 539.
\n

\n
[2] Lv, Wenyu, et al. \"Rt-detrv2: Improved baseline with bag-of-freebies for real-time detection transformer.\" arXiv preprint arXiv:2407.17140 (2024).
\n

\n
[3] He, Kaiming, et al. \"Deep residual learning for image recognition.\" Proceedings of the IEEE conference on computer vision and pattern recognition. 2016.
\n

Model Architecture:

Architecture Type: Convolution Neural Network (CNN), Transformer
\nNetwork Architecture: RT DETR V2 with ResNet50 backbone

Input:

Input Type(s): Image
\nInput Format(s): Red, Green, Blue (RGB)
\nInput Parameters: Two-Dimensional (2D)
\nOther Properties Related to Input: Image Range Needed (640 x 640 x 3), Pre-Processing Needed (value range [0, 255])

Output:

Output Type(s): A dictionary which contains two keys: \"pred_logits\" and \"pred_boxes\"
\nOutput Format: The value of key \"pred_logits\" is a tensor with shape [300, 1]. The value of the key \"pred_boxes\" is a tensor with shape [300, 4]
\nOutput Parameters: Two-Dimensional (2D)
\nOther Properties Related to Output: The values of the key \"pred_boxes\" are in range [0, 1], which represents normalized coordinates in format [center_x, center_y, width, height] relative to the input image size.

Our AI models are designed and/or optimized to run on NVIDIA GPU-accelerated systems. By leveraging NVIDIA’s hardware (e.g. GPU cores) and software frameworks (e.g., CUDA libraries), the model achieves faster training and inference times compared to CPU-only solutions.

Software Integration:

Runtime Engine(s):

[Holoscan SDK 2.9.0]

Supported Hardware Microarchitecture Compatibility:

[NVIDIA Ampere]
[NVIDIA Hopper]
[NVIDIA Lovelace]
[NVIDIA Volta]

[Preferred/Supported] Operating System(s):

[Linux]

Model Version(s):

rtdetrv2_timm_r50_nvimagenet_pretrained_neg_finetune_bhwc

Training, Testing, and Evaluation Datasets:

The total size: 60 recordings
\nTotal number of datasets: 1
\nDataset partition: Training 66%, testing 14%, validation 20%

Training Dataset:

Link: https://plus.figshare.com/articles/media/REAL-colon_dataset/22202866
\nData Collection Method by dataset

[Human]

Labeling Method by dataset

[Human]

Properties: 40 recordings of real-world colonoscopies.

Testing Dataset:

Link: https://plus.figshare.com/articles/media/REAL-colon_dataset/22202866
\nData Collection Method by dataset

[Human]

Labeling Method by dataset

[Human]

Properties : 12 recordings of real-world colonoscopies.

Evaluation Dataset:

Link: https://plus.figshare.com/articles/media/REAL-colon_dataset/22202866
\nBenchmark Score
\nmAP@0.5:0.95: 0.301

Data Collection Method by dataset

[Human]

Labeling Method by dataset

[Human]

Properties: 8 recordings of real-world colonoscopies.

Inference:

Acceleration Engine: Tensor(RT)
\nTest Hardware:

V100
A100
H100
RTX 6000 Ada

Ethical Considerations:

NVIDIA believes Trustworthy AI is a shared responsibility and we have established policies and practices to enable development for a wide array of AI applications. When downloaded or used in accordance with our terms of service, developers should work with their internal model team to ensure this model meets requirements for the relevant industry and use case and addresses unforeseen product misuse.\nUsers are responsible for ensuring the model-generated segmentations are appropriately evaluated and comply with applicable safety regulations and ethical standards. Please make sure you have proper rights and permissions for all input images, particularly for personal health information.

For more detailed information on ethical considerations for this model, please see the Model Card++ Explainability, Bias, Safety & Security, and Privacy Subcards.

Please report security vulnerabilities or NVIDIA AI Concerns here.

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\nPolyp Detection RT-DETR is a RT-DETR model that is designed to detect polyps in colonoscopy images.\nThis model is ready for commercial use.\n \n### License/Terms of Use:
\nGOVERNING TERMS: Use of this model is governed by the [NVIDIA Open Model License](https://www.nvidia.com/en-us/agreements/enterprise-software/nvidia-open-model-license/). Additional Information: [Apache License Version 2.0](https://github.com/lyuwenyu/RT-DETR/blob/main/LICENSE).\nYou are responsible for ensuring that your use of NVIDIA AI Foundation Models complies with all applicable laws.
\n \n## Reference(s):\nThe model is trained on the [REAL-Colon dataset](https://github.com/cosmoimd/real-colon-dataset) [1], utilizing the [RT-DETR v2](https://github.com/lyuwenyu/RT-DETR/tree/main/rtdetrv2_pytorch) architecture [2] and the [ResNet50](https://github.com/huggingface/pytorch-image-models/blob/main/timm/models/resnet.py) backbone [3]. The backbone is pretrained on the NVImageNet dataset.\n \n> [1] Biffi, Carlo, et al. \"REAL-Colon: A dataset for developing real-world AI applications in colonoscopy.\" Scientific Data 11.1 (2024): 539.\n \n> [2] Lv, Wenyu, et al. \"Rt-detrv2: Improved baseline with bag-of-freebies for real-time detection transformer.\" arXiv preprint arXiv:2407.17140 (2024).\n \n> [3] He, Kaiming, et al. \"Deep residual learning for image recognition.\" Proceedings of the IEEE conference on computer vision and pattern recognition. 2016.
\n \n## Model Architecture:
\n**Architecture Type:** Convolution Neural Network (CNN), Transformer
\n**Network Architecture:** RT DETR V2 with ResNet50 backbone
\n\n## Input:
\n**Input Type(s):** Image
\n**Input Format(s):** Red, Green, Blue (RGB)
\n**Input Parameters:** Two-Dimensional (2D)
\n**Other Properties Related to Input:** Image Range Needed (640 x 640 x 3), Pre-Processing Needed (value range [0, 255])
\n \n## Output:
\n**Output Type(s):** A dictionary which contains two keys: \"pred_logits\" and \"pred_boxes\"
\n**Output Format:** The value of key \"pred_logits\" is a tensor with shape [300, 1]. The value of the key \"pred_boxes\" is a tensor with shape [300, 4]
\n**Output Parameters:** Two-Dimensional (2D)
\n**Other Properties Related to Output:** The values of the key \"pred_boxes\" are in range [0, 1], which represents normalized coordinates in format [center_x, center_y, width, height] relative to the input image size.
\n\nOur AI models are designed and/or optimized to run on NVIDIA GPU-accelerated systems. By leveraging NVIDIA’s hardware (e.g. GPU cores) and software frameworks (e.g., CUDA libraries), the model achieves faster training and inference times compared to CPU-only solutions.
\n \n## Software Integration:
\n**Runtime Engine(s):**
\n* [Holoscan SDK 2.9.0]
\n \n**Supported Hardware Microarchitecture Compatibility:**
\n* [NVIDIA Ampere]
\n* [NVIDIA Hopper]
\n* [NVIDIA Lovelace]
\n* [NVIDIA Volta]
\n \n**[Preferred/Supported] Operating System(s):**
\n* [Linux]
\n\n## Model Version(s):\nrtdetrv2_timm_r50_nvimagenet_pretrained_neg_finetune_bhwc
\n \n# Training, Testing, and Evaluation Datasets:
\n \n**The total size:** 60 recordings
\n**Total number of datasets:** 1
\n**Dataset partition:** Training 66%, testing 14%, validation 20%
\n\n## Training Dataset: \n**Link:** https://plus.figshare.com/articles/media/REAL-colon_dataset/22202866
\n**Data Collection Method by dataset**
\n* [Human]
\n\n**Labeling Method by dataset**
\n* [Human]
\n\n**Properties:** 40 recordings of real-world colonoscopies.
\n\n ## Testing Dataset:\n**Link:** https://plus.figshare.com/articles/media/REAL-colon_dataset/22202866
\n**Data Collection Method by dataset**
\n* [Human]
\n\n**Labeling Method by dataset**
\n* [Human]
\n\n**Properties :** 12 recordings of real-world colonoscopies.
\n\n## Evaluation Dataset:\n**Link:** https://plus.figshare.com/articles/media/REAL-colon_dataset/22202866
\n**Benchmark Score**
\n mAP@0.5:0.95: 0.301\n\n**Data Collection Method by dataset**
\n* [Human]
\n\n**Labeling Method by dataset**
\n* [Human]
\n\n**Properties:** 8 recordings of real-world colonoscopies.
\n \n## Inference:\n**Acceleration Engine:** Tensor(RT)
\n**Test Hardware:**
\n* V100
\n* A100
\n* H100
\n* RTX 6000 Ada
\n\n## Ethical Considerations:\nNVIDIA believes Trustworthy AI is a shared responsibility and we have established policies and practices to enable development for a wide array of AI applications. When downloaded or used in accordance with our terms of service, developers should work with their internal model team to ensure this model meets requirements for the relevant industry and use case and addresses unforeseen product misuse. \nUsers are responsible for ensuring the model-generated segmentations are appropriately evaluated and comply with applicable safety regulations and ethical standards. Please make sure you have proper rights and permissions for all input images, particularly for personal health information.
\n\nFor more detailed information on ethical considerations for this model, please see the Model Card++ [Explainability](https://catalog.ngc.nvidia.com/orgs/nvidia/teams/holoscan/models/polyp_detection_rt_detr_model/explainability), [Bias](https://catalog.ngc.nvidia.com/orgs/nvidia/teams/holoscan/models/polyp_detection_rt_detr_model/bias), [Safety & Security](https://catalog.ngc.nvidia.com/orgs/nvidia/teams/holoscan/models/polyp_detection_rt_detr_model/safety-and-security), and [Privacy](https://catalog.ngc.nvidia.com/orgs/nvidia/teams/holoscan/models/polyp_detection_rt_detr_model/privacy) Subcards.\n\nPlease report security vulnerabilities or NVIDIA AI Concerns [here](https://www.nvidia.com/en-us/support/submit-security-vulnerability/).","displayName","Polyp Detection RT DETR Model",["D",1749728201191],"publisher","NVIDIA","latestVersion","versions","collectionCounts","imageUrl","/api/image/nvidia/clara-holoscan/models/polyp_detection_rt_detr_model","rawImageUrl","canGuestDownload","latestVersionSizeInBytes","licenseTerms","isMultinodeEnabled","isMultiArchitecture","bias","| Field | Response |\n|-----------------------------------------------------------------------------------------------------|------------------|\n| Participation considerations from adversely impacted groups [(protected classes)](https://www.senate.ca.gov/content/protected-classes) in model design and testing: | None |\n| Measures taken to mitigate against unwanted bias: | None |","explainability","| Field | Response |\n|--------------------------------------------------------------------------------------------------------|----------------------------------------------------------------------------------------------------|\n| Intended Domain: | Polyp Detection in Colonoscopy Images |\n| Model Type: | Object Detection |\n| Intended Users: | Intended for users that use models for polyp detection tasks. |\n| Output: | A dictionary which contains two keys: \"pred_logits\" and \"pred_boxes\". |\n| Describe how the model works: | The model processes a colonoscopy image to output predicted boxes around detected polyps and their associated logits. |\n| Name the adversely impacted groups this has been tested to deliver comparable outcomes regardless of: | Not Applicable |\n| Technical Limitations & Mitigation: | Limitation: This model's detection performance may not be 100% accurate, particularly in instances with variable lighting conditions, motion blur from camera movement and different video resolutions. Mitigation: The model can be finetuned to adapt to local imaging conditions for better performance. |\n| Verified to have met prescribed NVIDIA quality standards: | Yes |\n| Performance Metrics: | Mean Average Precision |\n| Potential Known Risks: | The model may result in missed polyps (false negatives) or incorrect detections (false positive) in clinical scenarios. This model is only intended to support diagnostic purposes and should serve only as a supplementary screening aid to assist healthcare professionals in identifying areas of interest during colonoscopy procedures. |\n| Licensing: | GOVERNING TERMS: Use of this model is governed by the [NVIDIA Open Model License](https://www.nvidia.com/en-us/agreements/enterprise-software/nvidia-open-model-license/). Additional Information: [Apache License Version 2.0](https://github.com/lyuwenyu/RT-DETR/blob/main/LICENSE). |","privacy","| Field | Response |\n|------------------------------------------------------------------------------------------------------------------------------------|----------------------------------------------------|\n| Generatable or reverse engineerable personal data? | None |\n| Personal data used to create this model? | None |\n| How often is dataset reviewed? | Before Release |\n| Is there provenance for all datasets used in training? | Yes |\n| Does data labeling (annotation, metadata) comply with privacy laws? | Yes |\n| Is data compliant with data subject requests for data correction or removal, if such a request was made? | Not Applicable |\n| Applicable Privacy Policy | [https://www.nvidia.com/en-us/about-nvidia/privacy-policy/](https://www.nvidia.com/en-us/about-nvidia/privacy-policy/) |","safetyAndSecurity","| Field | Response |\n|-----------------------------------------------------|-----------------------------------------------------------------------------------------------------------------------------------------------------|\n| Model Application(s): | Object Detection for Polyp in Colonoscopy Images |\n| Model Application Field(s): | Medical Devices |\n| Describe the life critical impact (if present). | The model is only intended to support diagnostic purposes. |\n| Use Case Restrictions: | Abide by [NVIDIA Open Model License](https://www.nvidia.com/en-us/agreements/enterprise-software/nvidia-open-model-license/). Additional Information: [Apache License Version 2.0](https://github.com/lyuwenyu/RT-DETR/blob/main/LICENSE). |\n|Model and dataset restrictions: | The Principle of least privilege (PoLP) is applied limiting access for dataset generation and model development. 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As part of our bot management service, this cookie helps manage incoming traffic that matches criteria associated with bots.\nThis is a CloudFoundry cookie","OptanonConsent","nvid.nvidia.com","This cookie is set by the cookie compliance solution from OneTrust. It stores information about the categories of cookies the site uses and whether visitors have given or withdrawn consent for the use of each category. This enables site owners to prevent cookies in each category from being set in the users browser, when consent is not given. The cookie has a normal lifespan of one year, so that returning visitors to the site will have their preferences remembered. It contains no information that can identify the site visitor.","events.nvidia.com","This cookie is associated with the Amazon Web Services Elastic Load Balancing functionality for routing client request on the server.Used to attribute commission to affiliates when you arrive at the website from an affiliate referral link. It is set when you click on one of our links and used to let the advertiser and us know the website from which you came.","sessionid","This is a very generic cookie name that may have different purposes on different sites, but generally it will be some kind of anonymous session identifier.","_csrf","This cookie is used to prevent Cross-Site Request Forgery (CSRF) attacks, ensuring that each request made to the server is from the user's browser and is intentional.","enterprise-support.nvidia.com","Used to apply end-user cookie consent preferences set by our client-side utility.Custom- Short Duration. Unique ID of an Enquiry- used to validate access to case, and load exisiting data.\n","renderCtx","academicgrants.nvidia.com","Used to store site parameters in the session for reuse across requests by a single client for functionality and performance reasons.","ph_phc_yQgAEdJJkVpI24NdSRID2mor1x1leRpDoC9yZ9mfXal_posthog","The PostHog ph_phc_xxx cookie is a session cookie used for identifying and tracking visitors on websites, helping us understand user behavior and website performance.","This cookie is managed by AWS and is used for load balancing.Used to attribute commission to affiliates when you arrive at the website from an affiliate referral link. It is set when you click on one of our links and used to let the advertiser and us know the website from which you came.","This cookie is associated with Akamai and is used to differentiate between traffic from humans and bots.","OptanonAlertBoxClosed","docs.ngc.nvidia.com","This cookie is set by websites using certain versions of the cookie law compliance solution from OneTrust. It is set after visitors have seen a cookie information notice and in some cases only when they actively close the notice down. It enables the website not to show the message more than once to a user. The cookie has a normal lifespan of one year and contains no personal information.","nv_co","__uxq412__ses.88c1","investor.nvidia.com","learn.learn.nvidia.com","This cookie is associated with the Amazon Web Services Elastic Load Balancing functionality for routing client request on the server.","pctrk","Used to count page views by unauthenticated users against license usage.","bm_s","bpazaws52gukakzc__ctrl0_ctl36_uccaptcha","bm_sv","store.nvidia.com","The __cf_bm cookie is a cookie necessary to support Cloudflare Bot Management, currently in private beta. As part of our bot management service, this cookie helps manage incoming traffic that matches criteria associated with bots.\n","This cookie name is used by DataDog to determine if cookies are supported on the website.dd_cookie_test","AMP_TLDTEST_xxxxxxxx","SESSlsd","This cookie is likely to be a session identifier used to maintain user session state across page requests.","mboxEdgeCluster","This cookie name is associated with Adobe Target which is used to communicate the correct edge cluster to at.js so that Target profiles can stay in sync as users navigate across a site.","_biz_pendingA","_rdt_em","This cookie name is associated with Reddit which is used to manage session state and user interactions.","megaNavCollapsed","_abck","The _abck cookie is associated with Akamai's Bot Manager, which is used to prevent fraud and abuse by safeguarding online interactions and detecting irregularities that could suggest malicious activity, such as bot-driven attacks or hacking attempts.","AMP_TEST","This cookie name AMP_TEST is used for internal analytics by the website operator, necessary for the functionality of the website's chat-box function, and to check whether the cookie storage is working properly.","idccsrf","This cookie name is associated with Salesforce which is used to track CrossSiteRequestForgery validation for certain single sign-on (SSO) flows.","_biz_flagsA","This cookie is used to remember users' settings as well as for authentication and analytics.","ApplicationGatewayAffinity","partners.nvidia.com","This cookie is used to maintain a user session by the server in a load balanced environment, to ensure the user has a consistent experience.","AMP_TEST_xxxxxxxx","bm_lso","This cookie name is associated with Akamai which is used to load the site as quickly as possible and to recognize bots.","SSESS###########","This cookie is likely to be a session cookie used to maintain an anonymized user session by the server in a secure environment, often seen in sites built with the Drupal content management system.","nvdeveloper.nvidia.com","__uxq412__id.88c1","QueueITAccepted-SDFrts345E-V3_{eventId}","TEST_AMCV_COOKIE_WRITE","This cookie is used to test whether cookies are enabled in the browser. It is a temporary cookie used to determine if the browser accepts cookies.","session","This cookie is typically used to maintain an anonymized user session by the server.","XSRF-TOKEN","This cookie is written to help with site security in preventing Cross-Site Request Forgery attacks.This cookie helps with site security in preventing Cross-Site Request Forgery attacks.","AWS ELB application load balancer","This cookie is associated with Akamai. It is used to analyse traffic to determine if it is automated traffic generated by bots or a human user.","bpazaws52gukakzc__ctrl0_ctl78_list_ctl09_systemcaptcha","PHPSESSID","PHP session cookie associated with embedded content from this domain.\n","base.manager.learn.nvidia.com","login_session","bm_ss","This cookie is used to help protect websites from automated bot traffic.","AWS ELB application load balancerUsed to attribute commission to affiliates when you arrive at the website from an affiliate referral link. 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