CatalogContainers
Containers
The NGC catalog hosts containers for AI/ML, metaverse, and HPC applications and are performance-optimized, tested, and ready to deploy on GPU-powered on-prem, cloud, and edge systems.
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NVIDIA AI Enterprise Support
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This container allows running compute-only applications using CUDA and TensorRT on the integrated GPU of Holoscan devkits (Clara AGX DevKit, IGX Orin DevKit) while other applications can run on dGPU, natively or in another container.
Run a GPU-accelerated haplotypecaller.
A Dermatology reference application for the Clara AGX platform.
Build an index for a PON file, which is the prerequisite for running **mutect pon**.
This tool converts variant calls in g.vcf format to VCF format.
Run RNA-seq data through the fq2bam pipeline. It will run STAR aligner, co-ordinate sorting and mark duplicates.
Accelerated GATK4 CollectWGSMetrics.
Generate a BQSR report for a BAM file.
Index a GVCF file.
Annotate variants based on a PON file.
Run bam2fq to convert BAM/CRAM to FASTQ.
Annotate variants based on a variant database.
Updates the Base Quality Scores using the BQSR report.
Run GPU mutect2 to convert BAM/CRAM to VCF.
Identifies candidate fusion transcripts.
Run a GPU-accelerated version of GATK’s CollectMultipleMetrics.
Sort BAM files.
A docker container is built from https://github.com/NVIDIA/spark-rapids-container.
It's used on Databricks to quickly deploy a GPU accelerated Spark cluster with Spark-Radpis(https://github.com/NVIDIA/spark-rapids).
This container is used for running the data preprocessing part of DeepVariant Training pipeline called make examples
The DOCA BlueMan service is a simple and user-friendly standalone web dashboard that runs completely on NVIDIA's DPU, transparent to the host. The service consolidates all the information an admin needs to know and serves as a one stop shop.
The MapR Persisent Application Client Container (PACC) supports containerization of existing and new applications by providing containers with persistent data access from anywhere. This a base image with GPU support, and communicating with the MapR Data Platform.
The DOCA BlueMan Converter service converts DOCA BlueMan-Frontend requests from http to gRPC.
Generate BAM/CRAM output given one or more pairs of FASTQ files. Can also optionally generate a BQSR report.
OmniSci (formerly MapD) is the pioneer in GPU-accelerated analytics, redefining speed and scale in big data querying and visualization. The OmniSci platform is used to find insights in data beyond the limits of mainstream analytics tools. Now you can easily build your own instance of the OmniSci Core with OmniSci Open Source edition.
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